Detailed information of matrix profile UN0461.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: p53-a
Matrix ID: UN0461.1
Class: p53
Family: p53-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 263 216 185 174 191 140 211 14 115 3 881 325 6 14 15 48 417 244 288 171 280 240 ]
C [ 231 229 208 311 322 321 24 6 9 986 15 65 4 288 892 512 94 152 165 434 224 210 ]
G [ 266 273 392 203 206 129 717 973 867 7 74 108 984 13 11 41 333 400 379 221 268 269 ]
T [ 240 282 215 312 281 410 48 8 10 4 30 503 6 685 82 400 155 203 169 174 227 282 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0461.1 UN0461 1 p53-a Ciona intestinalis
p53-related p53
UN0461.2 UN0461 2 p53-a Ciona intestinalis
p53-related p53
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: