Detailed information of matrix profile UN0460.1

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Profile summary

Name: Osr1-2-b
Matrix ID: UN0460.1
Class: C2H2
Family: Other
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 304 157 187 257 267 173 254 78 3 10 889 13 10 220 156 246 392 179 246 193 ]
C [ 355 398 340 216 244 328 177 25 984 50 29 960 689 62 242 164 159 218 390 326 ]
G [ 151 243 234 270 274 202 211 889 5 4 18 20 9 573 389 200 249 370 221 240 ]
T [ 190 202 239 258 214 297 357 7 8 935 64 7 292 145 213 391 200 233 144 241 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0460.1 UN0460 1 Osr1-2-b Ciona intestinalis
Other C2H2
UN0460.2 UN0460 2 Osr1-2-b Ciona intestinalis
Other C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: