Detailed information of matrix profile UN0460.1

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Profile summary

Name: Osr1-2-b
Matrix ID: UN0460.1
Class: C2H2
Family: Other
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 241 144 233 200 391 213 145 292 7 64 935 8 7 357 297 214 258 239 202 190 ]
C [ 240 221 370 249 200 389 573 9 20 18 4 5 889 211 202 274 270 234 243 151 ]
G [ 326 390 218 159 164 242 62 689 960 29 50 984 25 177 328 244 216 340 398 355 ]
T [ 193 246 179 392 246 156 220 10 13 889 10 3 78 254 173 267 257 187 157 304 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0460.1 UN0460 1 Osr1-2-b Ciona intestinalis
Other C2H2
UN0460.2 UN0460 2 Osr1-2-b Ciona intestinalis
Other C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: