Detailed information of matrix profile UN0429.1

  1. Home
  2. Matrix > UN0429.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ONAC127
Matrix ID: UN0429.1
Class: GCM
Family: NAC
Collection: UNVALIDATED
Taxon: Plants
Species: Oryza sativa
Data Type: ChIP-seq
Validation:
Uniprot ID: Q2R3N4  
Source: 33476364
Comment:

Sequence logo

Frequency matrix

         
A [ 21 11 49 0 1 50 53 1 51 12 14 ]
C [ 9 10 0 3 0 0 1 1 0 15 15 ]
G [ 15 27 1 46 48 0 1 52 2 11 21 ]
T [ 10 7 5 6 6 5 0 1 2 17 5 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0428.1 UN0428 1 ONAC127 Oryza sativa
NAC GCM
UN0429.1 UN0429 1 ONAC127 Oryza sativa
NAC GCM
UN0430.1 UN0430 1 ONAC127 Oryza sativa
NAC GCM
UN0428.2 UN0428 2 ONAC127 Oryza sativa
NAC GCM
UN0429.2 UN0429 2 ONAC127 Oryza sativa
NAC GCM
UN0430.2 UN0430 2 ONAC127 Oryza sativa
NAC GCM
     

-log(P-value) = 0.605445

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: