Detailed information of matrix profile UN0418.1

  1. Home
  2. Matrix > UN0418.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GLYMA-04G093300
Matrix ID: UN0418.1
Class: Homeo
Family: PLINC
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation:
Uniprot ID: I1JV50  
Source: GSE152314
Comment:

Sequence logo

Frequency matrix

         
A [ 2540 2241 0 7832 52 65 7766 0 2343 2467 ]
C [ 847 800 0 24 82 3 119 0 1184 1220 ]
G [ 1780 1883 7885 3 102 1 0 7885 1764 1814 ]
T [ 2718 2961 0 26 7649 7816 0 0 2594 2384 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0418.1 UN0418 1 GLYMA-04G093300 Glycine max
PLINC Homeo
UN0418.2 UN0418 2 GLYMA-04G093300 Glycine max
PLINC Homeo
     

-log(P-value) = 0.0508976

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: