Detailed information of matrix profile UN0416.1

  1. Home
  2. Matrix > UN0416.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: YAB5
Matrix ID: UN0416.1
Class: High-mobility
Family: YABBY
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation:
Uniprot ID: Q8GW46  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 224 200 270 447 0 904 809 0 26 752 78 198 ]
C [ 224 303 172 153 0 0 96 0 227 51 78 299 ]
G [ 224 297 276 52 94 0 0 96 121 51 78 198 ]
T [ 328 200 283 348 905 95 94 903 625 147 765 305 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0416.1 UN0416 1 YAB5 Arabidopsis thaliana
YABBY High-mobility
UN0416.2 UN0416 2 YAB5 Arabidopsis thaliana
YABBY High-mobility
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: