Detailed information of matrix profile UN0409.1

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Profile summary

Name: RKD2
Matrix ID: UN0409.1
Class: RWP-RK
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9CA66  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 261 383 247 20 750 985 102 405 7 66 934 968 405 349 5 191 17 383 193 ]
C [ 155 90 7 9 15 15 31 244 397 148 0 0 201 453 0 65 797 124 351 ]
G [ 358 370 726 952 165 0 687 111 68 763 51 17 264 194 995 135 2 286 210 ]
T [ 227 157 20 19 70 0 181 240 528 22 15 15 129 3 0 610 184 206 247 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0409.1 UN0409 1 RKD2 Arabidopsis thaliana
RWP-RK
UN0409.2 UN0409 2 RKD2 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: