Detailed information of matrix profile UN0406.1

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Profile summary

Name: NLP4
Matrix ID: UN0406.1
Class: RWP-RK
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LE38  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 258 263 477 132 0 986 8 0 986 219 203 367 279 159 356 ]
C [ 153 323 118 112 992 0 0 1000 0 129 436 142 121 356 244 ]
G [ 334 151 132 627 0 14 992 0 11 537 192 252 395 255 241 ]
T [ 255 263 274 129 8 0 0 0 3 115 170 238 205 230 159 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0406.1 UN0406 1 NLP4 Arabidopsis thaliana
RWP-RK
UN0406.2 UN0406 2 NLP4 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: