Detailed information of matrix profile UN0404.1

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Profile summary

Name: KHZ1
Matrix ID: UN0404.1
Class: CH3
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9C7C3  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 480 420 372 168 717 762 1000 1000 985 0 98 273 585 477 ]
C [ 127 173 137 362 98 22 0 0 0 0 130 105 15 173 ]
G [ 222 187 230 307 118 0 0 0 15 1000 347 172 298 148 ]
T [ 172 220 262 163 67 217 0 0 0 0 425 450 102 202 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0404.1 UN0404 1 KHZ1 Arabidopsis thaliana
CH3
UN0404.2 UN0404 2 KHZ1 Arabidopsis thaliana
CH3
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: