Detailed information of matrix profile UN0403.1

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Profile summary

Name: JGL
Matrix ID: UN0403.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q6S592  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 212 923 993 0 0 85 382 563 498 50 40 ]
C [ 78 27 0 988 30 87 237 190 7 108 82 ]
G [ 313 47 0 12 7 815 267 40 458 427 25 ]
T [ 397 3 7 0 963 13 115 207 37 415 853 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0403.1 UN0403 1 JGL Arabidopsis thaliana
C2H2
UN0403.2 UN0403 2 JGL Arabidopsis thaliana
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: