Detailed information of matrix profile UN0401.1

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Profile summary

Name: HMGB9
Matrix ID: UN0401.1
Class: ARID
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SGS2  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 491 288 430 1000 308 0 0 1000 1000 0 211 ]
C [ 101 85 150 0 0 0 0 0 0 0 128 ]
G [ 71 136 107 0 0 0 0 0 0 0 195 ]
T [ 337 491 314 0 692 1000 1000 0 0 1000 465 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0401.1 UN0401 1 HMGB9 Arabidopsis thaliana
ARID
UN0401.2 UN0401 2 HMGB9 Arabidopsis thaliana
ARID
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: