Detailed information of matrix profile UN0401.1

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Profile summary

Name: HMGB9
Matrix ID: UN0401.1
Class: ARID
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SGS2  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 465 1000 0 0 1000 1000 692 0 314 491 337 ]
C [ 195 0 0 0 0 0 0 0 107 136 71 ]
G [ 128 0 0 0 0 0 0 0 150 85 101 ]
T [ 211 0 1000 1000 0 0 308 1000 430 288 491 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0401.1 UN0401 1 HMGB9 Arabidopsis thaliana
ARID
UN0401.2 UN0401 2 HMGB9 Arabidopsis thaliana
ARID
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: