Detailed information of matrix profile UN0351.2

  1. Home
  2. Matrix > UN0351.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ARID6
Matrix ID: UN0351.2
Class: ARID
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: C0SUW7  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 337 334 96 59 19 699 716 20 31 640 665 449 396 283 ]
C [ 57 56 32 27 701 4 4 9 20 24 14 43 57 69 ]
G [ 72 60 23 10 0 14 5 5 1 19 10 47 39 58 ]
T [ 272 288 587 642 18 21 13 704 686 55 49 199 246 328 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0351.1 UN0351 1 ARID6 Arabidopsis thaliana
ARID
UN0351.2 UN0351 2 ARID6 Arabidopsis thaliana
ARID
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: