Detailed information of matrix profile UN0248.2

  1. Home
  2. Matrix > UN0248.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZSCAN5A
Matrix ID: UN0248.2
Class: C2H2
Family: More
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BUG6  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2792 2334 1670 747 998 2380 6699 2289 4463 347 15384 16091 15058 ]
C [ 1345 1038 15082 15901 15475 9397 13734 15544 13989 15897 502 15 348 ]
G [ 14535 1979 3772 119 421 1850 4003 251 4541 17 2638 2 3963 ]
T [ 4787 15143 190 12 1180 5852 2720 482 3043 430 255 37 122 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0248.1 UN0248 1 ZSCAN5A Homo sapiens
More C2H2
UN0248.2 UN0248 2 ZSCAN5A Homo sapiens
More C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: