Detailed information of matrix profile UN0243.2

  1. Home
  2. Matrix > UN0243.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZSCAN1
Matrix ID: UN0243.2
Class: C2H2
Family: Other
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q8NBB4  
Source: 28473536
Comment: not

Sequence logo

Frequency matrix

         
A [ 6962 109 688 10043 7052 55173 291 662 2829 4 0 0 34 0 ]
C [ 9726 210 150 6753 52300 3584 121 14194 120 38 0 21 15 39311 ]
G [ 10915 190 24548 11581 4509 637 56404 18479 55246 25 56660 0 56649 56 ]
T [ 38909 56567 46245 39723 1669 2292 588 23337 264 56650 0 56655 5 17333 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0243.1 UN0243 1 ZSCAN1 Homo sapiens
Other C2H2
UN0243.2 UN0243 2 ZSCAN1 Homo sapiens
Other C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: