Detailed information of matrix profile UN0134.1

  1. Home
  2. Matrix > UN0134.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: RHOXF2
Matrix ID: UN0134.1
Class: Homeo
Family: Paired-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BQY4  
Source: 28473536
Comment: not

Sequence logo

Frequency matrix

         
A [ 2269 0 13870 13870 0 110 0 2970 ]
C [ 5219 0 0 0 0 13870 13870 5364 ]
G [ 2134 0 345 0 1453 307 242 2476 ]
T [ 4247 13870 0 0 13870 0 664 3059 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0134.1 UN0134 1 RHOXF2 Homo sapiens
Paired-related Homeo
UN0134.2 UN0134 2 RHOXF2 Homo sapiens
Paired-related Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: