Detailed information of matrix profile UN0085.1

  1. Home
  2. Matrix > UN0085.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: clr-2
Matrix ID: UN0085.1
Class: C6
Family:
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation: 26463163
Uniprot ID: Q7SAJ9  
Source: 31133749
Comment: not

Sequence logo

Frequency matrix

         
A [ 50 21 5 0 9 256 359 273 257 231 ]
C [ 542 58 974 932 0 199 140 240 250 258 ]
G [ 68 38 0 57 985 190 271 247 174 171 ]
T [ 338 881 19 9 4 353 229 238 317 338 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0085.1 UN0085 1 clr-2 Neurospora crassa
C6
UN0085.2 UN0085 2 clr-2 Neurospora crassa
C6
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: