Detailed information of matrix profile UN0008.1

  1. Home
  2. Matrix > UN0008.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PK04914.1
Matrix ID: UN0008.1
Class: Tryptophan
Family: Trihelix
Collection: UNVALIDATED
Taxon: Plants
Species: Cannabis sativa
Data Type: PBM
Validation:
Uniprot ID:
Source: 31133749
Comment: not

Sequence logo

Frequency matrix

         
A [ 246 151 0 0 0 0 924 421 ]
C [ 13 828 990 0 0 307 0 156 ]
G [ 547 10 9 999 18 9 10 234 ]
T [ 191 10 0 0 980 682 64 187 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0008.1 UN0008 1 PK04914.1 Cannabis sativa
Trihelix Tryptophan
UN0008.2 UN0008 2 PK04914.1 Cannabis sativa
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: