Detailed information of matrix profile MA2454.1

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Profile summary
Name: SPL8D1
Matrix ID: MA2454.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 3959 33382 3011 2241 1313 41421 1190 2435 33947 2563 ]
C [ 4214 4372 4677 875 1455 2099 41454 2823 3827 6023 ]
G [ 3269 3438 1747 41152 1709 1394 2343 1526 3259 4816 ]
T [ 34958 5208 36965 2132 41923 1486 1413 39616 5367 32998 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2454.1 MA2454 1 SPL8D1 Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1075.1

ChIP-seq Centrality
-log(P-value): 1592.62

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1075.1

ChIP-seq Centrality
-log(P-value): 1179.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: