Detailed information of matrix profile MA2454.1

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Profile summary
Name: SPL8D1
Matrix ID: MA2454.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 32998 5367 39616 1413 1486 41923 2132 36965 5208 34958 ]
C [ 4816 3259 1526 2343 1394 1709 41152 1747 3438 3269 ]
G [ 6023 3827 2823 41454 2099 1455 875 4677 4372 4214 ]
T [ 2563 33947 2435 1190 41421 1313 2241 3011 33382 3959 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2454.1 MA2454 1 SPL8D1 Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1075.1

ChIP-seq Centrality
-log(P-value): 1592.62

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1075.1

ChIP-seq Centrality
-log(P-value): 1179.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: