Detailed information of matrix profile MA2449.1

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Profile summary
Name: SPL6A
Matrix ID: MA2449.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 19794 6868 1705 109327 518 3449 96910 767 1561 9459 2264 ]
C [ 12740 16789 2609 1011 81926 2727 6130 109893 100123 3520 99853 ]
G [ 69264 80497 1061 774 30239 655 4092 1021 2595 88882 3348 ]
T [ 11373 9017 107796 2059 488 106340 6039 1490 8892 11310 7706 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2449.1 MA2449 1 SPL6A Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1070.1

ChIP-seq Centrality
-log(P-value): 3099.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1070.1

ChIP-seq Centrality
-log(P-value): 2851.72

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: