Detailed information of matrix profile MA2449.1

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Profile summary
Name: SPL6A
Matrix ID: MA2449.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 7706 11310 8892 1490 6039 106340 488 2059 107796 9017 11373 ]
C [ 3348 88882 2595 1021 4092 655 30239 774 1061 80497 69264 ]
G [ 99853 3520 100123 109893 6130 2727 81926 1011 2609 16789 12740 ]
T [ 2264 9459 1561 767 96910 3449 518 109327 1705 6868 19794 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2449.1 MA2449 1 SPL6A Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1070.1

ChIP-seq Centrality
-log(P-value): 3099.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1070.1

ChIP-seq Centrality
-log(P-value): 2851.72

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: