Detailed information of matrix profile MA2434.1

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Profile summary
Name: SPL16A
Matrix ID: MA2434.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 6816 6390 86426 744 2699 79982 601 1504 5687 2743 6278 ]
C [ 14576 8501 1220 66446 3479 2092 86759 80672 1385 81067 7552 ]
G [ 63540 4095 1366 22942 1015 4060 1166 2293 80344 2600 9219 ]
T [ 5962 71908 1882 762 83701 4760 2368 6425 3478 4484 67845 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2434.1 MA2434 1 SPL16A Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1057.1

ChIP-seq Centrality
-log(P-value): 4235.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1057.1

ChIP-seq Centrality
-log(P-value): 4324.25

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: