Detailed information of matrix profile MA2434.1

  1. Home
  2. Matrix > MA2434.1

Profile summary
Name: SPL16A
Matrix ID: MA2434.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 67845 4484 3478 6425 2368 4760 83701 762 1882 71908 5962 ]
C [ 9219 2600 80344 2293 1166 4060 1015 22942 1366 4095 63540 ]
G [ 7552 81067 1385 80672 86759 2092 3479 66446 1220 8501 14576 ]
T [ 6278 2743 5687 1504 601 79982 2699 744 86426 6390 6816 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2434.1 MA2434 1 SPL16A Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1057.1

ChIP-seq Centrality
-log(P-value): 4235.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1057.1

ChIP-seq Centrality
-log(P-value): 4324.25

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: