Detailed information of matrix profile MA2408.1

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Profile summary
Name: BAD1
Matrix ID: MA2408.1
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: B4F7W2  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 85 42 169 9 751 502 29 32 123 1675 3036 229 ]
C [ 7412 7530 2124 783 18 4866 6378 7541 7370 3615 1531 6068 ]
G [ 168 62 5361 6871 6875 2150 1189 64 169 2239 2993 571 ]
T [ 19 50 30 21 40 166 88 47 22 155 124 816 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2408.1 MA2408 1 BAD1 Zea mays
TCP
     

-log(P-value) = 20208.7

TFFM details

TFFM ID: TFFM1034.1

ChIP-seq Centrality
-log(P-value): 38770.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1034.1

ChIP-seq Centrality
-log(P-value): 39247.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: