J
24
JASPAR
2024
Toggle navigation
Cart
0
You have 0 profile(s) in cart.
Search profiles and add to cart
JASPAR Blog
Detailed information of matrix profile
MA2399.1
Home
Matrix > MA2399.1
Search
Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
Advanced Options
Collection:
All collection
Taxon:
All taxonomic groups
Species:
All species
Data type:
All data types
Class:
All classes
Family:
All families
Versions:
All versions
Latest version
Profile summary
Add
Name:
LjSGA_053525.1
Matrix ID:
MA2399.1
Class:
TCP
Family:
Collection:
CORE
Taxon:
Plants
Species:
Data Type:
PBM
Validation:
12000681
Uniprot ID:
Source:
25215497
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
2
2
1
1
1
143
1
1
]
C [
2
2
1
1
1
570
996
996
]
G [
993
2
996
996
996
143
1
1
]
T [
2
995
1
1
1
143
1
1
]
Binding sites information
No Binding sites available for this model.
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2399.1
MA2399
1
LjSGA_053525.1
TCP
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: