Detailed information of matrix profile MA2398.1

  1. Home
  2. Matrix > MA2398.1

Profile summary
Name: AS2
Matrix ID: MA2398.1
Class: Other
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17913740
Uniprot ID: O04479  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 82 88 36 50 20 157 476 378 430 410 220 287 123 4 0 225 77 236 ]
C [ 726 36 302 936 0 41 250 22 50 232 118 116 813 4 148 626 22 41 ]
G [ 18 797 653 2 927 678 125 437 353 36 371 530 0 986 847 31 824 619 ]
T [ 173 77 6 11 52 123 148 161 166 321 289 66 63 4 4 116 75 102 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2398.1 MA2398 1 AS2 Arabidopsis thaliana
LBD Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: