Detailed information of matrix profile MA2398.1

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Profile summary
Name: AS2
Matrix ID: MA2398.1
Class: Other
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17913740
Uniprot ID: O04479  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 75 116 4 4 63 66 289 321 166 161 148 123 52 11 6 77 173 ]
C [ 619 824 31 847 986 0 530 371 36 353 437 125 678 927 2 653 797 18 ]
G [ 41 22 626 148 4 813 116 118 232 50 22 250 41 0 936 302 36 726 ]
T [ 236 77 225 0 4 123 287 220 410 430 378 476 157 20 50 36 88 82 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2398.1 MA2398 1 AS2 Arabidopsis thaliana
LBD Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: