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Detailed information of matrix profile
MA2377.1
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Matrix > MA2377.1
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Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
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Profile summary
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Name:
cassava45561.m1
Matrix ID:
MA2377.1
Class:
TCP
Family:
Collection:
CORE
Taxon:
Plants
Species:
Data Type:
PBM
Validation:
21241251
Uniprot ID:
Source:
25215497
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
83
20
102
153
36
5
1
893
5
]
C [
138
12
24
300
879
963
979
16
909
]
G [
589
898
834
421
11
7
2
84
37
]
T [
188
68
38
124
72
23
16
5
48
]
Binding sites information
No Binding sites available for this model.
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2377.1
MA2377
1
cassava45561.m1
TCP
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
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