Detailed information of matrix profile MA2050.1

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Profile summary
Name: NAC101
Matrix ID: MA2050.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: Q9LVA1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 896 784 715 248 2593 2461 32 82 2449 2513 587 706 787 ]
C [ 554 628 409 1815 11 145 35 2318 56 14 644 813 453 ]
G [ 460 374 941 253 17 7 2538 57 42 14 405 562 465 ]
T [ 739 863 584 333 28 36 44 192 102 108 1013 568 944 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2050.1 MA2050 1 NAC101 Arabidopsis thaliana
NAC GCM
MA2050.2 MA2050 2 NAC101 Arabidopsis thaliana
NAC GCM
     

-log(P-value) = 1569.31

TFFM details

TFFM ID: TFFM0996.1

ChIP-seq Centrality
-log(P-value): 3272.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0996.1

ChIP-seq Centrality
-log(P-value): 3220.83

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: