Detailed information of matrix profile MA2044.1

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Profile summary
Name: NAC007
Matrix ID: MA2044.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 20935069
Uniprot ID: Q9FWX2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 613 721 285 2117 1962 4 3 1974 2067 542 607 ]
C [ 525 368 1236 13 161 7 2037 60 15 624 686 ]
G [ 325 473 361 19 11 2144 9 40 13 413 437 ]
T [ 710 611 291 24 39 18 124 99 78 594 443 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2044.1 MA2044 1 NAC007 Arabidopsis thaliana
NAC GCM
MA2044.2 MA2044 2 NAC007 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0990.1

ChIP-seq Centrality
-log(P-value): 2682.99

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0990.1

ChIP-seq Centrality
-log(P-value): 2767.88

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: