Detailed information of matrix profile MA1965.1

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Profile summary
Name: SP5
Matrix ID: MA1965.1
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation: 29044119
Uniprot ID: Q6BEB4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3955 5114 0 0 0 20465 0 4 5738 4063 ]
C [ 5620 3372 92 234 0 231 403 3 4560 3624 ]
G [ 8246 7068 20604 20451 20649 0 20286 20683 8101 10436 ]
T [ 2875 5142 0 11 47 0 7 6 2297 2573 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1965.1 MA1965 1 SP5 Homo sapiens
Three-zinc C2H2
MA1965.2 MA1965 2 SP5 Homo sapiens
Three-zinc C2H2
     

-log(P-value) = 223.579

TFFM details

TFFM ID: TFFM0944.1

ChIP-seq Centrality
-log(P-value): 2002.06

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0944.1

ChIP-seq Centrality
-log(P-value): 1173.33

TFFM detailed summary logos

Description:

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GC Content: