Detailed information of matrix profile MA1961.1

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Profile summary
Name: PATZ1
Matrix ID: MA1961.1
Class: C2H2
Family: Factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 24380431
Uniprot ID: Q9HBE1  
Source: 27852650
Comment:

Sequence logo

Frequency matrix

         
A [ 125 125 68 195 1 1 355 1 1 1 54 51 ]
C [ 332 288 228 78 1 1 489 1 41 34 1 392 ]
G [ 446 543 680 727 997 997 1 997 957 964 944 523 ]
T [ 98 44 24 1 1 1 155 1 1 1 1 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1961.1 MA1961 1 PATZ1 Homo sapiens
Factors C2H2
MA1961.2 MA1961 2 PATZ1 Homo sapiens
Factors C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0941.1

ChIP-seq Centrality
-log(P-value): 320.11

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0941.1

ChIP-seq Centrality
-log(P-value): 212.976

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: