Detailed information of matrix profile MA1943.1

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Profile summary
Name: ETV2::HOXB13
Matrix ID: MA1943.1
Class: Tryptophan::Homeo
Family: Ets-related::HOX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: Q3KNT2   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2545 725 599 0 0 4791 4791 2114 722 4791 8 4791 4791 4791 1478 ]
C [ 720 4791 4791 0 0 13 804 1649 2627 70 270 166 49 773 1879 ]
G [ 953 838 42 4791 4791 12 14 1003 47 1344 0 231 16 312 624 ]
T [ 573 284 6 3 0 0 2050 25 2164 76 4791 2611 326 442 810 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1943.1 MA1943 1 ETV2::HOXB13 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
MA1943.2 MA1943 2 ETV2::HOXB13 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: