Detailed information of matrix profile MA1932.1

  1. Home
  2. Matrix > MA1932.1

Profile summary
Name: ELK1::HOXB13
Matrix ID: MA1932.1
Class: Tryptophan::Homeo
Family: Ets-related::HOX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 4647 171 145 0 0 6744 6674 340 76 1795 2549 87 5884 6592 5771 2635 ]
C [ 293 5717 6721 0 0 0 0 89 494 2220 76 331 126 407 1025 1455 ]
G [ 1843 880 51 6731 6717 117 82 6677 9 381 5222 354 387 507 709 1472 ]
T [ 449 143 41 0 298 0 368 0 6142 2325 462 6511 1569 286 960 1160 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1932.1 MA1932 1 ELK1::HOXB13 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
MA1932.2 MA1932 2 ELK1::HOXB13 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: