Detailed information of matrix profile MA1929.1

Profile summary

Name: CTCF
Matrix ID: MA1929.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 34326481
Uniprot ID: P49711  
Source: ReMap
Comment: TF

Sequence logo

Frequency matrix

A [ 764 2481 762 479 771 632 132 2530 101 55 523 2149 299 1191 142 450 1174 1622 2527 1574 1966 1378 1299 1719 1534 1309 3083 4617 631 1190 770 219 5128 787 ]
C [ 2015 807 1980 3084 246 5406 6326 3487 4085 6387 787 618 2483 935 79 518 3152 2269 942 2192 1429 1441 2079 1141 544 764 1773 571 3322 390 241 6252 319 1235 ]
G [ 1712 2317 3322 466 4715 381 76 254 86 114 244 2748 3551 357 6321 5068 791 1392 2470 1431 1412 2308 1915 1851 3913 3973 777 986 1155 627 5468 132 405 3839 ]
T [ 2275 1161 702 2737 1034 347 232 495 2494 210 5212 1251 433 4283 224 730 1649 1483 827 1569 1959 1639 1473 2055 775 720 1133 592 1658 4559 287 163 914 905 ]

Binding sites information

External links