| Name: | Msx |
| Matrix ID: | MA1901.1 |
| Class: | Homeo |
| Family: | NK |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: | No |
| A [ | 339 | 331 | 286 | 281 | 283 | 299 | 213 | 96 | 915 | 952 | 16 | 51 | 893 | 306 | 219 | 247 | 304 | 312 | 313 | 326 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 169 | 181 | 203 | 222 | 243 | 251 | 300 | 602 | 28 | 22 | 10 | 40 | 18 | 261 | 272 | 259 | 242 | 242 | 218 | 196 | ] |
| G [ | 163 | 180 | 198 | 217 | 247 | 237 | 264 | 45 | 29 | 10 | 6 | 11 | 45 | 211 | 214 | 221 | 206 | 188 | 165 | 158 | ] |
| T [ | 328 | 308 | 312 | 280 | 227 | 214 | 223 | 257 | 27 | 17 | 967 | 899 | 44 | 222 | 294 | 273 | 248 | 258 | 303 | 320 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1901.1 | MA1901 | 1 | Msx |
Ciona intestinalis
|
NK | Homeo |  |
| MA1901.2 | MA1901 | 2 | Msx |
Ciona intestinalis
|
NK | Homeo |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: