Detailed information of matrix profile MA1888.2

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Profile summary
Name: Irf-b
Matrix ID: MA1888.2
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32750546
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 31 40 935 672 974 33 21 207 213 648 30 15 312 25 12 ]
C [ 829 14 36 14 4 880 85 388 263 79 168 31 259 70 842 ]
G [ 33 917 19 56 3 71 10 207 226 176 676 14 10 47 22 ]
T [ 107 29 10 259 19 15 883 199 299 97 126 940 419 858 124 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1888.1 MA1888 1 Irf-b Ciona intestinalis
Interferon-regulatory Tryptophan
MA1888.2 MA1888 2 Irf-b Ciona intestinalis
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: