J
24
JASPAR
2024
Toggle navigation
Cart
0
You have 0 profile(s) in cart.
Search profiles and add to cart
JASPAR Blog
Detailed information of matrix profile
MA1818.1
Home
Matrix > MA1818.1
Search
Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
Advanced Options
Collection:
All collection
Taxon:
All taxonomic groups
Species:
All species
Data type:
All data types
Class:
All classes
Family:
All families
Versions:
All versions
Latest version
Profile summary
Add
Name:
Zm00001d052229
Matrix ID:
MA1818.1
Class:
AP2/EREBP
Family:
ERF/DREB
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
ChIP-seq
Validation:
24477691
Uniprot ID:
C4JBG6
Source:
33037196
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
975
1193
0
0
0
0
0
0
977
920
]
C [
4801
1587
8956
8956
0
8956
8956
0
5049
5142
]
G [
2029
5207
0
0
8956
0
0
8956
1720
1908
]
T [
1151
969
0
0
0
0
0
0
1210
986
]
Binding sites information
HTML file
FASTA file
BED file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1818.1
MA1818
1
Zm00001d052229
Zea mays
ERF/DREB
AP2/EREBP
JASPAR
TRANSFAC
MEME
RAW PFM
-log(P-value) = 31.5311
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: