Detailed information of matrix profile MA1795.1

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Profile summary
Name: RAP2-4
Matrix ID: MA1795.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15319480
Uniprot ID: Q8H1E4  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 297 230 127 78 181 113 31 0 0 137 ]
C [ 189 161 52 0 80 787 0 65 416 129 ]
G [ 245 141 550 822 242 7 968 933 0 554 ]
T [ 269 468 271 99 497 93 1 1 584 181 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1795.1 MA1795 1 RAP2-4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1795.2 MA1795 2 RAP2-4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: