Detailed information of matrix profile MA1793.1

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Profile summary
Name: NID1
Matrix ID: MA1793.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 27203113
Uniprot ID: Q84TG2  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 311 300 205 251 29 931 20 673 630 173 ]
C [ 159 222 282 69 15 15 14 93 29 245 ]
G [ 162 233 102 637 933 36 4 103 225 388 ]
T [ 368 245 412 43 23 18 962 132 116 195 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1793.1 MA1793 1 NID1 Arabidopsis thaliana
MYB-related Tryptophan
MA1793.2 MA1793 2 NID1 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: