Detailed information of matrix profile MA1783.1

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Profile summary
Name: NAC005
Matrix ID: MA1783.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: O81914  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 498 632 663 0 0 0 424 175 354 412 490 632 102 1000 997 2 131 469 692 ]
C [ 20 20 117 1000 0 2 63 178 115 63 171 93 286 0 3 0 271 92 27 ]
G [ 19 66 158 0 5 0 493 153 210 346 149 149 376 0 0 998 183 78 59 ]
T [ 463 281 63 0 995 998 20 495 320 180 190 125 236 0 0 0 415 361 222 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1783.1 MA1783 1 NAC005 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: