Detailed information of matrix profile MA1768.1

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Profile summary
Name: MYB30
Matrix ID: MA1768.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 26484765
Uniprot ID: Q9SCU7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 180 168 247 232 89 51 391 0 13 2 145 215 232 418 345 ]
C [ 45 45 57 0 0 173 22 0 3 0 0 67 67 84 195 ]
G [ 613 384 79 682 744 12 525 1000 103 15 843 537 439 357 306 ]
T [ 162 402 616 86 167 764 62 0 880 983 12 180 261 141 153 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1768.1 MA1768 1 MYB30 Arabidopsis thaliana
MYB Tryptophan
MA1768.2 MA1768 2 MYB30 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: