Detailed information of matrix profile MA1752.1

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Profile summary
Name: ERF025
Matrix ID: MA1752.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9FJ90  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 245 210 194 129 112 239 0 0 0 940 2 815 374 349 337 ]
C [ 326 341 172 342 356 3 950 1000 0 17 998 3 260 199 147 ]
G [ 129 137 257 77 57 758 0 0 1000 0 0 164 174 112 234 ]
T [ 301 312 377 452 476 0 50 0 0 43 0 18 192 341 282 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1752.1 MA1752 1 ERF025 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1752.2 MA1752 2 ERF025 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: