Detailed information of matrix profile MA1743.1

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Profile summary
Name: BZIP2
Matrix ID: MA1743.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9680995
Uniprot ID: Q9SI15  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 116 9 217 0 1000 0 9 0 70 848 24 183 577 317 279 ]
C [ 134 2 783 1000 0 995 0 0 803 0 152 789 101 180 296 ]
G [ 111 788 0 0 0 3 991 0 127 77 604 2 57 111 106 ]
T [ 639 202 0 0 0 2 0 1000 0 75 219 26 265 392 318 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1743.1 MA1743 1 BZIP2 Arabidopsis thaliana
Group Basic
MA1743.2 MA1743 2 BZIP2 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: