Detailed information of matrix profile MA1729.1

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Profile summary
Name: ZNF680
Matrix ID: MA1729.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27852650
Uniprot ID: Q8NEM1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1196 1547 4955 775 25 88 71 18 18 111 104 253 345 1818 377 ]
C [ 455 1870 213 163 39 5144 203 44 5691 1116 208 69 133 1096 3629 ]
G [ 469 770 396 808 41 40 13 23 14 17 60 4324 4870 1063 303 ]
T [ 3646 1579 202 4020 5661 494 5479 5681 43 4522 5394 1120 418 1789 1457 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1729.1 MA1729 1 ZNF680 Homo sapiens
More C2H2
MA1729.2 MA1729 2 ZNF680 Homo sapiens
More C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0922.1

ChIP-seq Centrality
-log(P-value): 3187.88

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0922.1

ChIP-seq Centrality
-log(P-value): 3316.19

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: