Detailed information of matrix profile MA1699.2

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Profile summary
Name: ceh-38
Matrix ID: MA1699.2
Class: Homeo
Family: HD-CUT
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 9593691
Uniprot ID: Q19720  
Source: 29284660
Comment: Class

Sequence logo

Frequency matrix

         
A [ 1423 1124 141 22 2150 8 22 11 2146 9 11 74 116 111 ]
C [ 102 50 41 22 3 13 1133 3 3 25 6 9 20 272 ]
G [ 208 115 59 24 9 6 11 2152 17 8 4 34 16 34 ]
T [ 444 888 1936 2109 15 2150 1011 11 11 2135 2156 2060 2025 1760 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1699.1 MA1699 1 ceh-38 Caenorhabditis elegans
HD-CUT Homeo
MA1699.2 MA1699 2 ceh-38 Caenorhabditis elegans
HD-CUT Homeo
     

-log(P-value) = 373.491

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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