Detailed information of matrix profile MA1699.1

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Profile summary
Name: ceh-38
Matrix ID: MA1699.1
Class: Homeo
Family: HD-CUT
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 9593691
Uniprot ID: Q19720  
Source: 29284660
Comment:

Sequence logo

Frequency matrix

         
A [ 734 992 1760 2025 2060 2156 2135 11 11 1011 2150 15 2109 1936 888 444 ]
C [ 547 250 34 16 34 4 8 17 2152 11 6 9 24 59 115 208 ]
G [ 400 669 272 20 9 6 25 3 3 1133 13 3 22 41 50 102 ]
T [ 496 266 111 116 74 11 9 2146 11 22 8 2150 22 141 1124 1423 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1699.1 MA1699 1 ceh-38 Caenorhabditis elegans
HD-CUT Homeo
MA1699.2 MA1699 2 ceh-38 Caenorhabditis elegans
HD-CUT Homeo
     

-log(P-value) = 373.491

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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