J
24
JASPAR
2024
Toggle navigation
Cart
0
You have 0 profile(s) in cart.
Search profiles and add to cart
JASPAR Blog
Detailed information of matrix profile
MA1686.1
Home
Matrix > MA1686.1
Search
Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
Advanced Options
Collection:
All collection
Taxon:
All taxonomic groups
Species:
All species
Data type:
All data types
Class:
All classes
Family:
All families
Versions:
All versions
Latest version
Profile summary
Add
Name:
ARF13
Matrix ID:
MA1686.1
Class:
B3
Family:
ARF
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
D9HNU0
Source:
30375394
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
6270
646
3160
27
31
8
27
49
25
48
265
649
408
1172
]
C [
875
6710
214
393
55
943
8175
8022
8271
8001
7420
463
4009
652
]
G [
516
518
4283
33
8284
111
86
67
55
29
145
6725
543
794
]
T [
745
532
749
7953
36
7344
118
268
55
328
576
569
3446
5788
]
Binding sites information
HTML file
FASTA file
BED file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1686.1
MA1686
1
ARF13
Zea mays
ARF
B3
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: