Detailed information of matrix profile MA1677.1

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Profile summary
Name: NAC078
Matrix ID: MA1677.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q84K00  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1959 1361 1366 149 362 734 81 63 70 84 1282 1671 ]
C [ 1146 1053 757 57 35 142 5745 22 58 9 1361 929 ]
G [ 951 1650 2610 49 98 228 9 255 18 5734 1228 1538 ]
T [ 1780 1772 1103 5581 5341 4732 1 5496 5690 9 1965 1698 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1677.1 MA1677 1 NAC078 Arabidopsis thaliana
NAC GCM
MA1677.2 MA1677 2 NAC078 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0680.1

ChIP-seq Centrality
-log(P-value): 8016.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0680.1

ChIP-seq Centrality
-log(P-value): 7896.28

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: